BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H10SP1|AL428633
(848 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1543 1662 0.0
>3x_Contig1543
Length = 9648
Score = 1662 bits (838), Expect = 0.0
Identities = 846/848 (99%), Gaps = 1/848 (0%)
Strand = Plus / Plus
Query: 1 atctgttttaatggtacctttcaacacttcacctctaacaaatgatcgataaagtggtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 atctgttttaatggtacctttcaacacttcacctctaacaaatgatcgataaagtggtga 2103
Query: 61 atcgctctttgatatggaagaagcgacgacttcgttttgtttgaacgagatcccatcgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 atcgctctttgatatggaagaagcgacgacttcgttttgtttgaacgagatcccatcgga 2163
Query: 121 cccgcttttgatgtccaagtttcgaagttgtccgtcgaacaaacgttcccaccaggcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 cccgcttttgatgtccaagtttcgaagttgtccgtcgaacaaacgttcccaccaggcttc 2223
Query: 181 actgtcatcatgtcctggtgcacatccaagccctttcttatctttcttgtgtttcacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2224 actgtcatcatgtcctggtgcacatccaagccctttcttatctttcttgtgtttcacaag 2283
Query: 241 aatcggttttttcagtcctccgttccgtaaggcctcaccttcttgccagccatacgattt 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2284 aatcggttttttcagtcctccgttccgtaag-cctcaccttcttgccagccatacgattt 2342
Query: 301 aaggtaccctttactgtccatgggtaatatatggtggaactgaggtataattatcgggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2343 aaggtaccctttactgtccatgggtaatatatggtggaactgaggtataattatcgggga 2402
Query: 361 ttcacaatggtagatcagcaaacagatcggtaatcttaccaatgtcaatgtcactttaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2403 ttcacaatggtagatcagcaaacagatcggtaatcttaccaatgtcaatgtcactttaat 2462
Query: 421 tgctgtatatcatcttctcatctcatctcatcgcgagttgaagaatttcttttcaaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2463 tgctgtatatcatcttctcatctcatctcatcgcgagttgaagaatttcttttcaaagag 2522
Query: 481 aaacatttcgattgtggtcacgtgaacacagtcttcatcattacccggagcaatagcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2523 aaacatttcgattgtggtcacgtgaacacagtcttcatcattacccggagcaatagcatc 2582
Query: 541 acgtgccacggtttttcttcttttcctgtgtcatttaaggttgtcaccacactgccaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2583 acgtgccacggtttttcttcttttcctgtgtcatttaaggttgtcaccacactgccaaga 2642
Query: 601 cttactctatggaggatctaaaattacttaacacatggggctacaccgtggctggctcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2643 cttactctatggaggatctaaaattacttaacacatggggctacaccgtggctggctcca 2702
Query: 661 tgagttgaggccatgaaacgtgtacgtttcatgctccgcctgagacaaaaccacaaaacc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2703 tgagttgaggccatgaaacgtgtacgtttcatgctccgcctgagacaaaaccacaaaacc 2762
Query: 721 ccaagavacctctaattaattggtattcaaaacacacaactccacagatagacacggcgt 780
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2763 ccaagaaacctctaattaattggtattcaaaacacacaactccacagatagacacggcgt 2822
Query: 781 gtgtgtattctgagtgggctttaaactctaaactctaaactctaaaccatgtacatcaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2823 gtgtgtattctgagtgggctttaaactctaaactctaaactctaaaccatgtacatcaag 2882
Query: 841 atctccgg 848
||||||||
Sbjct: 2883 atctccgg 2890
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6841
Number of Sequences: 1807
Number of extensions: 6841
Number of successful extensions: 314
Number of sequences better than 1.0e-20: 1
length of query: 848
length of database: 10,358,551
effective HSP length: 16
effective length of query: 832
effective length of database: 10,329,639
effective search space: 8594259648
effective search space used: 8594259648
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)